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2205.11210

On a new decomposition of the graph Laplacian and the binomial structure of mass-action systems

Stefan Müller

correctmedium confidence
Category
math.DS
Journal tier
Specialist/Solid
Processed
Sep 28, 2025, 12:56 AM

Audit review

The paper proves the core factorization Ak diag(Kk) = −IE Ak,E IE^T with Ak,E invertible for any auxiliary directed tree and derives the chain nonnegativity and star diagonal-dominance cases (Propositions 1–3 and Theorem 4). The candidate solution establishes the same statements via a different linear-algebraic route: it (i) derives AK = 0 and properties of M := A diag(K), (ii) constructs an explicit core Ak,E = −(IE^T IE)^{-1} IE^T M IE (IE^T IE)^{-1} and proves uniqueness/invertibility, (iii) identifies the star core as the principal submatrix of −M, and (iv) obtains the chain case from the star via a bidiagonal similarity (U) and a cut-balance argument. These align with the paper’s results and are logically sound. Minor slip: in the star case, the candidate briefly states G = IE^T IE = I, which is false (G has 2 on the diagonal and 1 off-diagonal), but this is not used to derive the conclusions. Paper and model thus agree on correctness, with different proof styles. See Proposition 1 (existence/invertibility), Proposition 2 (chain), Proposition 3 (star), and Theorem 4 in the paper for the corresponding results. The matrix-tree facts AKk = 0 and zero row/column sums are also stated in the paper.

Referee report (LaTeX)

\textbf{Recommendation:} minor revisions

\textbf{Journal Tier:} specialist/solid

\textbf{Justification:}

The paper provides a crisp structural decomposition of directed Laplacians through auxiliary trees, leading to a transparent binomial formulation of weakly reversible mass-action dynamics and a streamlined stability proof. The results are correct and of clear technical value. Some derivations (e.g., the chain case’s partial-sum nonnegativity) are compressed and would benefit from a few additional lines or a lemma; clarifying uniqueness and giving an explicit linear-algebraic formula for the core would also enhance readability. These are presentational improvements rather than substantive corrections.